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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015944485.1_cds_XP_016487293.1_78043
CDS Infomation

[gene=LOC107807431] [db_xref=GeneID:107807431] [protein=vacuolar amino acid transporter 1-like isoform X6] [protein_id=XP_016487293.1] [location=complement(join(13671..13681,13776..13921,14018..14037,14113..14248,14327..14546,14625..14805,14895..14918,15467..15681,16041..16324,18307..18494))] [gbkey=CDS]
Sequence

ATGGCGCGGAACAAAGACGGGGAAAACGAGGAAGATGAGTTTTTCTTGGAAGAATCAGAT
GAAAATCTTGAAGCTGGTCATATTAATACAGAGGAAGACATGACAGAAGATGATGAACAT
GAAGAAGGAGAAGGGAGGCCTTCTCGTTCCTCTTCTTTTGTTTCTCAACAGTGGCCACAG
AGTGTCAGGGAGTCTATGGATGTTTACACAATTGCTGCATCACCAAACTTTGGATCCTTT
CAGCGTGTAGCCAGCTTTAAGTTTTCAACTTCTGATATCTCTAGTCAAAATAACTTGGTT
TGGAGTGTAAAGACCCCTTTGCTGTCTATTGATGGGAAGAGTCACCAGAAAAGCGACCTT
GATGTGCCCTGGAGATCACAAGTTTCATGGCCAGAAAAGGTTTCATCACATATAATCACT
GGAGAACTTCCAATTAGCCACGGATGTAGCCTTGTTCAAACTATATTCAATGGGACAAAT
GTCATGGCTGGAGTTGGACTTCTTTCTACACCTTATACAGTGAAACAAGCAGGTTGGGCA
AGCATGGCAGTGCTTGTTCTTTTTGCATTAGTCTGTTGTTATACTGCTTGTCTTATGCGA
TATTGCTTTGAAAGCAAAGAGGGAATTACATCATTTCCGGACATGGGAGAAGCTGCATTT
GGAAAATATGGACGTATTCTAGTATCTATTATTTTGTACATGGAGCTATATTCCTCTTGT
GTAGAATTTATCATACTTGAAGGGGATAATCTCACGCGGCTATACCCTGGAGCACACATT
AACTTGTTTGGTTCTCGATTGGACTCCATGCACTTGTTTGCAATCATTAGTGTTCTTATC
ATTCTGCCCACAGTTTGGTTGAAAGATTTACGATTGATCTCTTACCTTTCAGTCGGAGGC
CTCATTTCGACAGCTCTAGTGGTCGTATGTCTTCTCTTACTTGGGACAGTAGATCAAATT
GGATTTCGTCAGACGGCTCCAGTGGTAAATTGGAGTGGTATTCCATTTGCAATAGGTGTC
TATGGGTATTGCTATTCAGGGCACTCTGTTTTCCCAAATATCTATCAATCTATGGCCGAC
AAAACCAAATTTACAACAGCAGTCATTGTGTGCTTTACTTTGTGTATTCTCTTATACGGT
GGTGCTGCAATCATGGGATTTCTTATGTTTGGTCAATCTACGCATTCACAGATTACTCTG
AATTTGCCAAAACATGCTTTTGTTTCTAATGTTGCATTATGGACGACAGTAGTAACTCCA
GTTACCAAATACTCCTTGTTACTGAACCCGTTAGCTAGAAGTATTGAGGAGTTGCTTCCT
GCAGCTTTGGCTACTAGTTACTGGTTTTTCATTGTCCTAAGGACAGCATTGGTTATATCT
ACACTTTGTGTTGCATTTCTTCTTCCCTTTTTTGCTGCCTGTTGA

Peptide Sequence

PEP ID

XP_016487293.1
PEP Infomation

PREDICTED: vacuolar amino acid transporter 1-like isoform X6 [Nicotiana tabacum]
Sequence

MARNKDGENEEDEFFLEESDENLEAGHINTEEDMTEDDEHEEGEGRPSRSSSFVSQQWPQ
SVRESMDVYTIAASPNFGSFQRVASFKFSTSDISSQNNLVWSVKTPLLSIDGKSHQKSDL
DVPWRSQVSWPEKVSSHIITGELPISHGCSLVQTIFNGTNVMAGVGLLSTPYTVKQAGWA
SMAVLVLFALVCCYTACLMRYCFESKEGITSFPDMGEAAFGKYGRILVSIILYMELYSSC
VEFIILEGDNLTRLYPGAHINLFGSRLDSMHLFAIISVLIILPTVWLKDLRLISYLSVGG
LISTALVVVCLLLLGTVDQIGFRQTAPVVNWSGIPFAIGVYGYCYSGHSVFPNIYQSMAD
KTKFTTAVIVCFTLCILLYGGAAIMGFLMFGQSTHSQITLNLPKHAFVSNVALWTTVVTP
VTKYSLLLNPLARSIEELLPAALATSYWFFIVLRTALVISTLCVAFLLPFFAAC

Transcript Sequence

Gene sequence data has not been registered.